LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-520h


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-520h
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
131796-131819
0.011
7
8mer
81577-81599
0.008
7
7mer
250851-250868
0.007
0
8mer
84832-84855
0.007
2
8mer+wobble
114083-114109
0.007
4
8mer
199222-199247
0.007
1
7mer
145004-145029
0.006
7
7mer
198069-198094
0.006
0
7mer
79390-79408
0.006
1
7mer
187393-187413
0.006
3
9mer
14018-14036
0.006
0
8mer
10737-10745
0.005
0
7mer
18590-18611
0.005
1
7mer
136117-136131
0.005
1
8mer
255302-255323
0.005
1
8mer
194469-194495
0.005
1
6mer
267242-267259
0.005
1
6mer
267254-267272
0.005
1
7mer
227119-227138
0.004
1
7mer
228159-228174
0.004
1
8mer
203677-203701
0.004
0
7mer
2128-2133
0.004
0
6mer
59221-59238
0.004
9
7mer
68858-68875
0.004
1
7mer
113950-113955
0.004
1
7mer
123030-123042
0.004
2
6mer
144508-144523
0.004
8
6mer
114587-114597
0.004
8
7mer
61681-61700
0.004
1
8mer
225499-225516
0.004
1
8mer
180852-180864
0.003
1
8mer
52138-52155
0.003
1
8mer
115889-115907
0.003
1
7mer
255708-255713
0.003
1
8mer
104449-104470
0.003
2
7mer
140250-140269
0.003
0
8mer
244868-244887
0.003
0
8mer
250228-250246
0.003
0
8mer
234653-234670
0.003
1
6mer
216002-216015
0.003
5
7mer
29789-29802
0.003
1
7mer
242477-242491
0.003
0
6mer
86206-86226
0.003
7
8mer
221550-221567
0.003
1
8mer
67840-67857
0.003
1
7mer
240009-240028
0.003
1
6mer
47188-47214
0.003
6
6mer
226093-226099
0.003
4
7mer
35349-35354
0.003
1
8mer
236477-236496
0.003
1
8mer
177422-177441
0.003
1
8mer
155507-155532
0.003
1
6mer
692-713
0.003
2
8mer
11456-11473
0.003
1
6mer
81715-81726
0.003
10
7mer
154793-154815
0.003
2
6mer
176556-176575
0.003
4
8mer
188888-188905
0.003
1
8mer
64974-64991
0.003
1
6mer
88206-88228
0.003
4
7mer
151624-151639
0.003
2
6mer
149361-149381
0.003
5
8mer
109479-109504
0.003
1
8mer
187108-187125
0.003
0
7mer
73380-73397
0.003
0
8mer
253394-253411
0.003
1
6mer
183024-183043
0.003
5
8mer
121447-121464
0.003
1
8mer
38248-38267
0.002
1
8mer
239055-239080
0.002
1
8mer
262100-262117
0.002
1
7mer
85222-85227
0.002
1
6mer
74002-74018
0.002
2
7mer
177826-177843
0.002
1
8mer
225075-225092
0.002
1
8mer
237875-237892
0.002
1
8mer
251555-251572
0.002
0
6mer
78229-78251
0.002
3
7mer
243979-243996
0.002
0
8mer
223519-223538
0.002
1
6mer
196679-196695
0.002
1
8mer
102882-102907
0.002
1
6mer
1225-1242
0.002
4
6mer
49054-49077
0.002
0
8mer
77175-77194
0.002
1
8mer
73056-73074
0.002
0
8mer
213967-213982
0.002
2
8mer
252064-252081
0.002
1
8mer
114899-114918
0.002
1
8mer
192478-192497
0.002
0
7mer
117039-117052
0.002
0
7mer
259280-259304
0.002
0
8mer
249441-249458
0.002
0
8mer
60223-60242
0.002
1
7mer
148881-148893
0.002
0
6mer
3344-3362
0.002
7
7mer
244012-244026
0.002
1
8mer
14858-14875
0.002
0
8mer
213283-213300
0.002
0
6mer
211499-211523
0.002
2
7mer
153372-153389
0.002
0
6mer
44389-44408
0.002
2
8mer
209140-209159
0.002
1
6mer
8203-8226
0.002
5
8mer
263103-263122
0.002
0
6mer
216363-216386
0.002
5
6mer
157098-157118
0.002
3
8mer
174447-174464
0.002
0
8mer
8825-8842
0.002
0
8mer
231655-231673
0.002
0
8mer
98436-98448
0.002
0
8mer
206112-206131
0.002
0
6mer
19975-20000
0.002
3
8mer
167718-167739
0.002
1
6mer
205048-205065
0.002
2
6mer
83356-83373
0.002
1
8mer
247892-247909
0.002
0
7mer
240919-240936
0.002
1
6mer
123703-123723
0.002
1
6mer
135415-135427
0.002
1
6mer
166386-166410
0.002
1
8mer
37465-37484
0.002
Not Conserved
6mer
166634-166654
0.002
5
6mer
221210-221227
0.002
1
6mer
213827-213843
0.002
3
8mer
193332-193349
0.002
Not Conserved
6mer
203668-203691
0.002
0
7mer
134409-134430
0.002
1
6mer
21502-21519
0.002
2
8mer
67550-67569
0.002
1
6mer
135040-135058
0.002
0
6mer
227447-227451
0.002
4
6mer
99629-99648
0.002
5
6mer
77027-77041
0.002
2
6mer
104306-104329
0.002
1
6mer
16143-16164
0.002
1
6mer
185061-185070
0.002
1
7mer
133414-133431
0.002
0
6mer
138940-138964
0.002
1
8mer
231040-231065
0.002
0
6mer
89138-89164
0.002
0
6mer
122134-122159
0.002
1
8mer
181153-181170
0.002
Not Conserved
8mer
202789-202806
0.002
Not Conserved
6mer
74402-74419
0.002
3
6mer
125007-125034
0.002
0
6mer
242685-242707
0.002
0
6mer
38922-38945
0.002
1
6mer
245081-245103
0.002
0
6mer
1657-1677
0.002
1
6mer
163186-163206
0.002
1
6mer
189506-189516
0.002
1
6mer
26972-26983
0.002
2
6mer
45554-45559
0.002
1
6mer
45824-45844
0.002
1
6mer
90079-90097
0.002
1
6mer
209819-209839
0.002
1
6mer
38004-38024
0.002
2
6mer
117347-117368
0.002
2
6mer
219640-219664
0.002
4
6mer
130702-130714
0.002
1
6mer
157380-157402
0.002
Not Conserved
7mer
121079-121105
0.001
0
6mer
57796-57814
0.001
2
6mer
208354-208377
0.001
1
6mer
128396-128421
0.001
1
6mer
5325-5352
0.001
3
8mer
45044-45061
0.001
0
6mer
265737-265748
0.001
1
6mer
29012-29022
0.001
0
6mer
74820-74835
0.001
Not Conserved
6mer
13049-13070
0.001
4
8mer
122235-122252
0.001
1
6mer
55702-55728
0.001
1
6mer
43210-43230
0.001
1
6mer
64772-64797
0.001
2
7mer
27639-27659
0.001
0
6mer
234065-234084
0.001
1
6mer
34962-34977
0.001
1
6mer
206721-206743
0.001
2
6mer
112033-112055
0.001
0
8mer
135106-135131
0.001
1
6mer
67438-67449
0.001
2
8mer
27726-27745
0.001
0
6mer
202036-202053
0.001
0
6mer
104777-104792
0.001
1
6mer
30119-30140
0.001
0
6mer
13077-13096
0.001
9
8mer
14163-14180
0.001
1
8mer
45891-45905
0.001
1
6mer
150358-150380
0.001
1
6mer
90541-90559
0.001
Not Conserved
6mer
69752-69770
0.001
0
6mer
44922-44936
0.001
0
6mer
51023-51047
0.001
1
6mer
203428-203446
0.001
1
6mer
207968-207992
0.001
0
6mer
12271-12292
0.001
1
8mer
250904-250921
0.001
0
6mer
185327-185343
0.001
1
6mer
246030-246049
0.001
0
6mer
223031-223051
0.001
1
6mer
201241-201266
0.001
Not Conserved
6mer
47789-47814
0.001
1
6mer
238175-238192
0.001
0
6mer
210299-210325
0.001
0
6mer
2317-2338
0.001
0
6mer
237257-237274
0.001
0
6mer
264530-264551
0.001
1
6mer
237563-237574
0.001
1
6mer
103523-103544
0.001
0
6mer
93248-93266
0.001
1
6mer
170792-170809
0.001
1
6mer
72457-72482
0.001
1
6mer
55851-55866
0.001
1
6mer
151634-151658
0.001
3
8mer
234715-234732
0.001
0
6mer
57842-57847
0.001
1
6mer
88254-88264
0.001
1
6mer
237399-237421
0.001
0
6mer
88224-88234
0.001
1
6mer
14135-14140
0.001
0
6mer
203696-203713
0.001
1
6mer
166649-166672
0.001
2
6mer
117460-117474
0.001
1
6mer
237672-237696
0.001
Not Conserved
6mer
58622-58642
0.001
1
6mer
251694-251713
0.001
0
6mer
144572-144588
0.001
3
6mer
1673-1698
0.001
1
6mer
246066-246088
0.001
0
6mer
196702-196717
0.000
1
6mer
237280-237302
0.000
1
RP13-753N3.1
hsa-miR-520h
1.000
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000584157
Biotype: antisense
Gene id: ENSG00000263531
Gene Name: RP13-753N3.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5-26
0.075
0
8mer
515-534
0.067
0
8mer
141-158
0.054
0
AC002519.8
hsa-miR-520h
0.999
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000570073
Biotype: sense_intronic
Gene id: ENSG00000259810
Gene Name: AC002519.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2060-2077
0.048
1
8mer
1136-1157
0.032
1
6mer
540-558
0.014
1
6mer
628-641
0.010
1
6mer
248-252
0.009
0
7mer
728-741
0.009
0
6mer
636-654
0.002
Not Conserved
RP11-13N13.5
hsa-miR-520h
0.999
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000584148
Biotype: sense_intronic
Gene id: ENSG00000264188
Gene Name: RP11-13N13.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
308-325
0.071
0
8mer
146-165
0.054
0
RP13-991F5.2
hsa-miR-520h
0.998
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000582249
Biotype: antisense
Gene id: ENSG00000266445
Gene Name: RP13-991F5.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
107-124
0.061
0
7mer
688-705
0.029
0
7mer
395-414
0.025
0
XLOC_003276
hsa-miR-520h
0.998
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006679
Biotype: transcript isomorph
Gene id: XLOC_003276
Gene Name: XLOC_003276
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
43-58
0.079
7
7mer
11-37
0.035
7
XLOC_010706
hsa-miR-520h
0.998
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021520
Biotype: transcript isomorph
Gene id: XLOC_010706
Gene Name: XLOC_010706
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
26-52
0.035
0
7mer
299-320
0.018
1
6mer
3719-3735
0.018
1
6mer
227-249
0.017
1
7mer
383-398
0.015
0
6mer
2066-2086
0.003
0
6mer
1526-1535
0.002
0
AC006548.28
hsa-miR-520h
0.997
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
325-330
0.011
1
8mer
63298-63322
0.007
1
6mer
112-130
0.004
1
8mer
24818-24843
0.003
0
7mer
75137-75160
0.003
0
6mer
35624-35650
0.003
3
8mer
81628-81645
0.002
1
7mer
36841-36859
0.002
1
8mer
66882-66899
0.002
Not Conserved
6mer
73712-73738
0.002
1
6mer
27904-27925
0.002
1
8mer
41577-41590
0.002
0
6mer
40328-40344
0.002
1
6mer
53552-53573
0.002
Not Conserved
6mer
42135-42151
0.002
Not Conserved
6mer
26833-26854
0.002
1
6mer
28640-28660
0.002
1
6mer
15921-15943
0.002
3
6mer
67216-67239
0.002
0
6mer
31710-31731
0.002
1
6mer
19089-19109
0.002
1
6mer
68803-68826
0.002
0
6mer
65782-65806
0.002
0
6mer
74486-74502
0.002
0
6mer
16952-16967
0.002
0
6mer
81280-81304
0.002
1
6mer
27458-27483
0.002
0
6mer
53863-53881
0.001
Not Conserved
6mer
51565-51583
0.001
Not Conserved
6mer
76559-76584
0.001
0
6mer
33474-33493
0.001
1
6mer
45756-45778
0.001
Not Conserved
6mer
67713-67732
0.001
0
6mer
63527-63547
0.001
1
6mer
46195-46207
0.001
Not Conserved
6mer
52255-52272
0.001
Not Conserved
6mer
46892-46908
0.001
Not Conserved
6mer
9855-9876
0.001
0
6mer
55343-55357
0.001
0
6mer
40095-40119
0.001
0
6mer
77612-77637
0.001
0
6mer
71476-71497
0.001
0
6mer
33588-33603
0.001
0
6mer
8651-8672
0.001
1
6mer
75513-75527
0.001
0
6mer
75809-75827
0.001
0
6mer
76422-76436
0.001
0
6mer
74046-74069
0.001
0
6mer
74809-74822
0.001
0
6mer
27339-27350
0.001
1
6mer
46492-46510
0.001
Not Conserved
6mer
28519-28544
0.001
1
6mer
75696-75718
0.001
0
6mer
46430-46435
0.001
Not Conserved
6mer
46366-46383
0.001
Not Conserved
6mer
76536-76553
0.001
0
6mer
75070-75092
0.001
0
CTA-221G9.11
hsa-miR-520h
0.996
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623422
Biotype: lincRNA
Gene id: ENSG00000279298
Gene Name: CTA-221G9.11
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
848-865
0.067
0
7mer
154-171
0.036
0
KCNQ1OT1
hsa-miR-520h
0.996
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
52213-52231
0.008
1
8mer
422-439
0.007
1
7mer
55121-55137
0.006
4
8mer
38449-38468
0.006
0
7mer
16094-16111
0.005
0
7mer
88674-88698
0.004
2
7mer
10012-10017
0.004
0
8mer
12911-12930
0.004
1
7mer
15676-15702
0.004
1
7mer
77778-77797
0.003
1
7mer
68915-68940
0.003
1
7mer
46705-46730
0.003
1
6mer
84101-84111
0.003
1
6mer
73766-73779
0.002
3
6mer
4842-4858
0.002
2
6mer
14563-14574
0.002
1
6mer
7564-7580
0.002
1
8mer
78736-78760
0.002
0
8mer
12149-12174
0.002
0
6mer
88780-88802
0.002
2
6mer
86641-86665
0.002
1
6mer
63146-63159
0.002
1
6mer
42331-42356
0.002
1
6mer
62363-62388
0.002
1
6mer
65026-65044
0.002
1
6mer
11052-11075
0.002
0
6mer
82189-82216
0.002
1
6mer
30891-30909
0.002
0
6mer
80496-80522
0.001
1
6mer
86138-86159
0.001
1
6mer
78831-78855
0.001
1
6mer
87667-87684
0.001
1
6mer
23461-23488
0.001
0
6mer
26167-26189
0.001
0
6mer
46994-47016
0.001
1
6mer
48914-48939
0.001
1
CTC-265F19.1
hsa-miR-520h
0.995
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000587894
Biotype: sense_intronic
Gene id: ENSG00000267749
Gene Name: CTC-265F19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
88-109
0.018
0
8mer
917-934
0.014
0
6mer
1780-1795
0.013
1
6mer
1526-1542
0.009
1
6mer
1589-1611
0.009
1
6mer
1399-1415
0.007
1
6mer
1335-1352
0.007
1
6mer
1462-1479
0.007
1
6mer
1653-1669
0.005
0
6mer
1716-1738
0.005
0
6mer
1143-1158
0.003
0
6mer
1207-1222
0.002
Not Conserved
LINC00657
hsa-miR-520h
0.995
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000565493
Biotype: lincRNA
Gene id: ENSG00000260032
Gene Name: LINC00657
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
79-101
0.017
6
7mer
500-519
0.017
Not Conserved
8mer
2873-2897
0.015
3
8mer
3514-3539
0.010
4
8mer
2575-2581
0.009
4
8mer
1948-1970
0.007
1
8mer
3184-3190
0.007
1
6mer
728-748
0.005
3
6mer
4682-4696
0.003
1
8mer
1639-1656
0.003
1
6mer
2709-2713
0.003
5
6mer
1060-1069
0.003
1
HCG11
hsa-miR-520h
0.994
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000411553
Biotype: lincRNA
Gene id: ENSG00000228223
Gene Name: HCG11
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1927-1948
0.028
1
8mer
1005-1011
0.018
0
8mer
1611-1632
0.018
1
6mer
383-402
0.018
1
6mer
861-879
0.009
1
6mer
2518-2538
0.003
Not Conserved
FAM224A
hsa-miR-520h
0.993
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000419557
Biotype: lincRNA
Gene id: ENSG00000233522
Gene Name: FAM224A
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1723-1743
0.049
0
8mer
584-590
0.035
0
6mer
642-659
0.008
0
XLOC_006976
hsa-miR-520h
0.992
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014909
Biotype: transcript isomorph
Gene id: XLOC_006976
Gene Name: XLOC_006976
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
9-15
0.028
0
7mer
1732-1751
0.027
1
8mer
1565-1582
0.022
1
8mer
2149-2166
0.012
0
PCAT19
hsa-miR-520h
0.991
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000595837
Biotype: lincRNA
Gene id: ENSG00000267107
Gene Name: PCAT19
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
30-55
0.060
1
6mer
760-780
0.018
1
6mer
690-713
0.009
1
RP3-323A16.1
hsa-miR-520h
0.989
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623959
Biotype: antisense
Gene id: ENSG00000279184
Gene Name: RP3-323A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
53939-53959
0.009
1
7mer
10114-10119
0.006
0
7mer
47844-47849
0.005
1
7mer
40193-40213
0.004
1
7mer
5850-5869
0.004
0
8mer
1287-1311
0.003
Not Conserved
8mer
28242-28259
0.003
1
8mer
38890-38907
0.003
1
8mer
36602-36619
0.003
1
8mer
10834-10855
0.003
1
7mer
27072-27087
0.003
1
6mer
53567-53586
0.003
0
7mer
35239-35256
0.003
0
8mer
3003-3024
0.003
1
6mer
22327-22343
0.002
3
6mer
37944-37959
0.002
3
6mer
52439-52459
0.002
1
7mer
11780-11801
0.002
1
6mer
40031-40041
0.002
1
6mer
45997-46008
0.002
1
6mer
15601-15627
0.002
1
6mer
9548-9567
0.002
1
6mer
3506-3526
0.002
0
6mer
50513-50532
0.002
1
6mer
47106-47110
0.002
1
6mer
44114-44119
0.001
0
6mer
20458-20479
0.001
0
6mer
27466-27485
0.001
1
8mer
47953-47970
0.001
0
6mer
4609-4629
0.001
0
6mer
11162-11185
0.001
1
6mer
11904-11923
0.001
Not Conserved
6mer
22351-22370
0.001
0
XLOC_013424
hsa-miR-520h
0.989
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027818
Biotype: transcript isomorph
Gene id: XLOC_013424
Gene Name: XLOC_013424
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3-20
0.067
0
6mer
342-348
0.018
0
XLOC_012755
hsa-miR-520h
0.989
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026408
Biotype: transcript isomorph
Gene id: XLOC_012755
Gene Name: XLOC_012755
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
35-52
0.065
0
7mer
283-305
0.020
0
TSIX
hsa-miR-520h
0.987
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000604411
Biotype: lincRNA
Gene id: ENSG00000270641
Gene Name: TSIX
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-520h
Sequence: acaaagugcuucccuuuagagu
MirBase ID: MIMAT0002867
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
30755-30767
0.008
1
8mer
40-57
0.007
0
7mer
20023-20042
0.004
1
7mer
8985-9010
0.004
1
6mer
33150-33176
0.004
8
8mer
27475-27482
0.003
1
8mer
3394-3413
0.003
1
7mer
24340-24359
0.003
1
8mer
5221-5246
0.003
1
6mer
31757-31779
0.003
4
6mer
29030-29052
0.002
2
6mer
25815-25824
0.002
3
8mer
7155-7174
0.002
0
6mer
31306-31327
0.002
1
6mer
4467-4473
0.002
1
6mer
6062-6077
0.002
1
6mer
5845-5864
0.002
2
6mer
17745-17759
0.002
1
6mer
1548-1565
0.002
1
6mer
1692-1719
0.002
1
6mer
18956-18972
0.002
1
6mer
20289-20305
0.002
2
6mer
2416-2430
0.002
2
6mer
9269-9295
0.002
1
6mer
18772-18796
0.001
0
6mer
34873-34887
0.001
1
6mer
18211-18229
0.001
0
6mer
16831-16856
0.001
0
6mer
8386-8404
0.001
0
6mer
28076-28093
0.001
1
6mer
12729-12756
0.001
Not Conserved
6mer
34550-34573
0.001
0
6mer
6073-6091
0.001
1
6mer
6211-6230
0.001
1
6mer
6115-6135
0.001
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept